ADHDgene Database

Gene Report

Basic Info

Approved Symbol	SNRPN
Previous Symbol	PWCR
Symbol Alias	SMN, SM-D, HCERN3, SNRNP-N, SNURF-SNRPN, RT-LI
Approved Name	small nuclear ribonucleoprotein polypeptide N
Previous Name	Prader-Willi syndrome chromosome region
Name Alias	tissue-specific splicing protein, "SM protein N", "small nuclear ribonucleoprotein N"
Location	15q12
Position	chr15:25068794-25664609, +
External Links	HGNC: 11164 Entrez Gene: 6638 Ensembl: ENSG00000128739 UCSC: uc001ywt.1
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by CNV; Mapped by PBA pathway; Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 1)

ID	Location	Size	Band	Type	Inheritance
CNV_Williams[2010]_46	chr15:21016722-25902239 (NCBI Build 36.1 (hg18))	4933636	15q11.2-15q13.1	Gain

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
15q11.2-13.3	chr15:20700000-33600000	1 (1/0/0)

Gene related GO terms (count: 8)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005681	spliceosomal complex	Cellular Component	TAS[1533223]	51

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0030532	small nuclear ribonucleoprotein complex	Cellular Component	TAS[7512861]	12
GO:0009725	response to hormone stimulus	Biological Process		11
GO:0008380	RNA splicing	Biological Process	TAS[1533223]	65
GO:0005686	U2 snRNP	Cellular Component		4
GO:0005685	U1 snRNP	Cellular Component		2
GO:0003723	RNA binding	Molecular Function		104
GO:0005515	protein binding	Molecular Function	IPI[14715275]	910

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with SNRPN (count: 3)

Gene Symbol	Pathway Count	Pathway List
SNRPA1	6	small nuclear ribonucleoprotein complex; RNA splicing; U2 snRNP; spliceosomal complex; RNA binding; protein binding;
LSM4	5	small nuclear ribonucleoprotein complex; RNA splicing; spliceosomal complex; RNA binding; protein binding;
SNRPG	5	small nuclear ribonucleoprotein complex; RNA splicing; spliceosomal complex; RNA binding; protein binding;

Genes shared at least 2 KEGG pathways with SNRPN (count: 0)

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Region: chr15:25068794..25664609 View in gBrowse