ADHDgene Database

Gene Report

Basic Info

Approved Symbol	TAF1C
Symbol Alias	TAFI110, TAFI95, SL1, MGC:39976
Approved Name	TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
Previous Name	TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kD
Location	16q24
Position	chr16:84211461-84220662, -
External Links	HGNC: 11534 Entrez Gene: 9013 Ensembl: ENSG00000103168 UCSC: uc002fhm.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by CNV; Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 1)

ID	Location	Size	Band	Type	Inheritance
CNV_Jarick[2012]_36	chr16:82208011-82797605 (NCBI36 / hg18)	589595	16q23.3-16q24.1	dup

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
16q23.1-24.3	chr16:74100000-90354753	1 (1/0/0)

Gene related GO terms (count: 9)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0006360	transcription from RNA polymerase I promoter	Biological Process		6
GO:0006361	transcription initiation from RNA polymerase I promoter	Biological Process		6
GO:0005654	nucleoplasm	Cellular Component		183
GO:0006355	regulation of transcription, DNA-dependent	Biological Process		158
GO:0006366	transcription from RNA polymerase II promoter	Biological Process	TAS[7801123]	62
GO:0010467	gene expression	Biological Process		140
GO:0006362	transcription elongation from RNA polymerase I promoter	Biological Process		4
GO:0006363	termination of RNA polymerase I transcription	Biological Process		4
GO:0003677	DNA binding	Molecular Function		220

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with TAF1C (count: 5)

Gene Symbol	Pathway Count	Pathway List
GTF2H3	8	transcription from RNA polymerase I promoter; transcription initiation from RNA polymerase I promoter; nucleoplasm; regulation of transcription, DNA-dependent; transcription from RNA polymerase II promoter; gene expression; transcription elongation from RNA polymerase I promoter; termination of RNA polymerase I transcription;
POLR1A	7	transcription from RNA polymerase I promoter; transcription initiation from RNA polymerase I promoter; nucleoplasm; gene expression; transcription elongation from RNA polymerase I promoter; termination of RNA polymerase I transcription; DNA binding;
TAF1B	6	transcription from RNA polymerase I promoter; transcription initiation from RNA polymerase I promoter; nucleoplasm; gene expression; transcription elongation from RNA polymerase I promoter; termination of RNA polymerase I transcription;
SSRP1	5	nucleoplasm; regulation of transcription, DNA-dependent; transcription from RNA polymerase II promoter; gene expression; DNA binding;
TAF4B	5	nucleoplasm; regulation of transcription, DNA-dependent; transcription from RNA polymerase II promoter; gene expression; DNA binding;

Genes shared at least 2 KEGG pathways with TAF1C (count: 0)

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Region: chr16:84211461..84220662 View in gBrowse