ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	ZNF48
Previous Symbol	ZNF553
Symbol Alias	DKFZp762K013, FLJ31751, MGC43952
Approved Name	zinc finger protein 48
Previous Name	zinc finger protein 553
Location	16p11.2
Position	chr16:30389427-30411429, +
External Links	HGNC: 13114 Entrez Gene: 197407 Ensembl: ENSG00000180035 UCSC: uc002dya.1
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by CNV

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 3)

ID	Location	Size	Band	Type	Inheritance
CNV_Williams[2010]_16	chr16:29563594-30367556 (NCBI Build 36.1 (hg18))	803963	16p11.2	Loss
CNV_Williams[2010]_34	chr16:29342178-31155425 (NCBI Build 36.1 (hg18))	1813248	16p11.2	Loss	De novo
CNV_Williams[2010]_39	chr16:29342178-31155425 (NCBI Build 36.1 (hg18))	1813247	16p11.2	Gain

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 5)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 5)

ID	Name	Type	No. of Genes in ADHDgene
GO:0005634	nucleus	Cellular Component	770
GO:0003677	DNA binding	Molecular Function	220
GO:0006355	regulation of transcription, DNA-dependent	Biological Process	158
GO:0006351	transcription, DNA-dependent	Biological Process	247
GO:0008270	zinc ion binding	Molecular Function	323

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with ZNF48 (count: 61)

Gene Symbol	Pathway Count	Pathway List
HINFP	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
IGHMBP2	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
PRDM10	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZBTB22	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZBTB26	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZBTB3	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZBTB34	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZBTB37	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZBTB43	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZBTB44	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZBTB6	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZBTB9	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZFP1	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZFP2	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZFP37	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF142	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF169	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF214	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF215	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF257	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF263	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF264	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF276	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF286B	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF354B	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF354C	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF454	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF469	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF484	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF510	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF511	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF521	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF532	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF544	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF57	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF618	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF624	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF629	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF646	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF648	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF664	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF668	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF669	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF670	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF676	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF688	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF689	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF70	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF705E	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF74	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF75A	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF764	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF77	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF771	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF778	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF782	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF785	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF79	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF805	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF879	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;
ZNF883	5	nucleus; DNA binding; regulation of transcription, DNA-dependent; transcription, DNA-dependent; zinc ion binding;

Genes shared at least 2 KEGG pathways with ZNF48 (count: 0)

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Region: chr16:30389427..30411429 View in gBrowse