SNP Report
Basic Info
Name |
rs1018040
dbSNP
Ensembl
|
Location |
Chr1:218705814(Fwd) |
Variant Alleles |
T/A |
Ancestral Allele |
T |
No. of Studies |
1 (significant: 0; non-significant: 0; trend: 1) |
Source |
Literature-origin
|
SNP related studies (count: 1)
SNP related genes (count: 0)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 7)
rs_ID |
Functional Annotation |
r2[population] |
rs11118121
|
upstream_gene_variant |
0.809[CHB]; 0.867[JPT]
|
rs4846489
|
upstream_gene_variant |
0.809[CHB]; 0.867[JPT]
|
rs2047163
|
|
0.803[CHB]; 0.867[JPT]
|
rs12563275
|
|
0.803[CHB]; 0.867[JPT]
|
rs11118123
|
upstream_gene_variant |
0.809[CHB]; 0.867[JPT]
|
rs987074
|
upstream_gene_variant |
0.809[CHB]; 0.867[JPT]
|
rs11118120
|
|
0.923[CEU]; 1.0[CHB]; 0.896[CHD]; 0.97[GIH]; 1.0[JPT]; 1.0[MEX]; 1.0[TSI]
|