rs_ID |
Functional Annotation |
r2[population] |
rs11080114
|
intron_variant |
0.961[CEU]; 0.8[GIH]; 0.955[MEX]; 0.955[TSI]
|
rs11080118
|
NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.924[CEU]; 1.0[CHB]; 1.0[CHD]; 0.932[GIH]; 1.0[JPT]
|
rs7211246
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.959[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs4528633
|
NMD_transcript_variant; intron_variant; upstream_gene_variant |
0.889[CEU]; 0.911[MEX]
|
rs9900974
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.889[CEU]; 0.911[MEX]
|
rs7221154
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.961[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.906[MEX]; 0.934[TSI]
|
rs4343336
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.843[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.904[LWK]; 0.955[MEX]; 1.0[TSI]; 1.0[YRI]
|
rs8071742
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.961[CEU]; 0.847[GIH]; 0.866[MEX]; 0.955[TSI]
|
rs8065059
|
downstream_gene_variant; intron_variant; nc_transcript_variant |
0.961[CEU]; 0.931[CHB]; 0.956[CHD]; 0.933[GIH]; 0.955[MEX]; 0.977[TSI]
|
rs10853136
|
downstream_gene_variant; intron_variant |
0.902[CEU]
|
rs4350617
|
downstream_gene_variant; intron_variant; nc_transcript_variant |
0.961[CEU]; 0.931[CHB]; 0.956[CHD]; 0.955[GIH]; 0.85[JPT]; 0.955[MEX]; 0.977[TSI]
|
rs7224199
|
3_prime_UTR_variant; downstream_gene_variant |
0.961[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.908[MEX]; 0.934[TSI]
|
rs17825877
|
downstream_gene_variant |
0.843[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.907[LWK]; 0.955[MEX]; 0.977[TSI]; 1.0[YRI]
|
rs9898353
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.961[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs2020939
|
intron_variant |
0.815[TSI]
|
rs7220004
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.889[CEU]; 0.911[MEX]
|
rs9905950
|
intron_variant; nc_transcript_variant |
0.887[CEU]; 0.93[CHB]; 0.84[JPT]
|
rs7222685
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
1.0[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs7207021
|
NMD_transcript_variant; downstream_gene_variant; intron_variant |
0.961[CEU]; 0.847[GIH]; 0.907[MEX]; 0.932[TSI]
|
rs12602065
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant |
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs9902340
|
NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.924[CEU]; 1.0[CHB]; 1.0[CHD]; 0.932[GIH]; 1.0[JPT]; 0.869[MEX]
|
rs4575590
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.96[CEU]
|
rs8082175
|
intron_variant; nc_transcript_variant |
0.961[CEU]; 0.931[CHB]; 0.956[CHD]; 0.955[GIH]; 0.85[JPT]; 0.955[MEX]; 0.977[TSI]
|
rs6505158
|
downstream_gene_variant; intron_variant |
0.961[CEU]; 0.847[GIH]; 0.954[MEX]; 0.955[TSI]
|
rs7212292
|
intron_variant; upstream_gene_variant |
0.889[CEU]
|
rs9912741
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.961[CEU]; 0.847[GIH]; 0.955[MEX]; 0.932[TSI]
|
rs7217638
|
NMD_transcript_variant; intron_variant; upstream_gene_variant |
0.961[CEU]; 0.847[GIH]; 0.955[MEX]; 0.932[TSI]
|
rs12103671
|
intron_variant |
0.889[CEU]; 0.911[MEX]
|
rs4547389
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.889[CEU]; 0.911[MEX]
|
rs9896062
|
NMD_transcript_variant; intron_variant; upstream_gene_variant |
0.961[CEU]; 0.847[GIH]; 0.955[MEX]; 0.955[TSI]
|
rs7216631
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
1.0[CHB]; 0.896[JPT]
|
rs9303628
|
NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.924[CEU]; 1.0[CHB]; 0.956[CHD]; 0.932[GIH]; 1.0[JPT]; 0.823[MEX]
|
rs4470197
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.961[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs12449783
|
NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
1.0[JPT]
|
rs7225686
|
NMD_transcript_variant; intron_variant; upstream_gene_variant |
0.889[CEU]; 0.911[MEX]
|
rs12939344
|
NMD_transcript_variant; downstream_gene_variant; intron_variant |
0.889[CEU]; 0.911[MEX]
|
rs7219456
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.889[CEU]; 0.911[MEX]
|
rs4795529
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.889[CEU]; 0.931[CHB]; 0.956[CHD]; 0.886[GIH]; 0.85[JPT]; 0.911[MEX]
|
rs4581755
|
intron_variant; nc_transcript_variant |
0.961[CEU]; 0.931[CHB]; 0.956[CHD]; 0.955[GIH]; 0.85[JPT]; 0.955[MEX]; 0.977[TSI]
|
rs4465650
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; upstream_gene_variant |
0.961[CEU]; 0.822[GIH]; 0.91[TSI]
|
rs7220151
|
NMD_transcript_variant; intron_variant; upstream_gene_variant |
0.961[CEU]
|
rs11080115
|
intron_variant |
0.889[CEU]; 0.911[MEX]
|
rs12941382
|
intron_variant; upstream_gene_variant |
0.887[CEU]; 0.909[MEX]
|
rs9908901
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant |
0.961[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs7223786
|
NMD_transcript_variant; intron_variant |
0.961[CEU]; 0.847[GIH]; 0.955[MEX]; 0.955[TSI]
|
rs9906340
|
NMD_transcript_variant; downstream_gene_variant; intron_variant |
0.961[CEU]; 0.845[GIH]; 0.954[MEX]; 0.955[TSI]
|
rs4427857
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.924[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs4493117
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.923[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs4075623
|
NMD_transcript_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.961[CEU]; 0.847[GIH]; 0.955[MEX]; 0.955[TSI]
|
rs4328498
|
NMD_transcript_variant; intron_variant |
0.961[CEU]; 0.847[GIH]; 0.91[MEX]; 0.932[TSI]
|
rs7221743
|
intron_variant; synonymous_variant |
0.961[CEU]; 0.8[GIH]; 0.955[MEX]; 0.955[TSI]
|
rs9900911
|
NMD_transcript_variant; downstream_gene_variant; intron_variant |
0.961[CEU]; 0.845[GIH]; 0.91[MEX]; 0.932[TSI]
|
rs7217961
|
downstream_gene_variant; intron_variant |
0.889[CEU]; 0.911[MEX]
|
rs9904336
|
NMD_transcript_variant; intron_variant; upstream_gene_variant |
0.96[CEU]
|
rs7218379
|
downstream_gene_variant; intron_variant |
0.889[CEU]; 0.909[MEX]
|
rs1906451
|
downstream_gene_variant |
1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.955[MEX]; 1.0[TSI]
|
rs8074028
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.961[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.911[MEX]; 0.934[TSI]
|
rs7213517
|
downstream_gene_variant; intron_variant |
0.889[CEU]; 0.911[MEX]
|
rs4429345
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.843[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.969[LWK]; 1.0[MEX]; 0.852[MKK]; 1.0[TSI]; 1.0[YRI]
|
rs2054846
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant |
1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.955[MEX]; 1.0[TSI]
|
rs4074170
|
3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; synonymous_variant; upstream_gene_variant |
0.961[CEU]
|
rs11653805
|
NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.887[CEU]
|
rs2054847
|
NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.857[CHB]; 0.92[JPT]
|
rs9902453
|
NMD_transcript_variant; intron_variant |
0.961[CEU]; 0.84[GIH]; 0.955[MEX]; 0.955[TSI]
|
rs12948898
|
intron_variant; upstream_gene_variant |
0.889[CEU]; 0.911[MEX]
|
rs9890205
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; upstream_gene_variant |
0.961[CEU]; 0.847[GIH]; 0.955[MEX]; 0.932[TSI]
|
rs8080343
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.961[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 0.915[JPT]; 0.911[MEX]; 0.933[TSI]
|
rs7212497
|
NMD_transcript_variant; intron_variant; upstream_gene_variant |
0.961[CEU]; 0.847[GIH]; 0.955[MEX]; 0.955[TSI]
|
rs8065261
|
intron_variant; nc_transcript_variant |
0.961[CEU]; 0.931[CHB]; 0.956[CHD]; 0.955[GIH]; 0.955[MEX]; 0.977[TSI]
|
rs4356528
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.955[MEX]; 1.0[TSI]
|
rs4294864
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.961[CEU]; 0.856[CHB]; 0.85[JPT]
|
rs6505162
|
5_prime_UTR_variant; NMD_transcript_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.81[CEU]; 0.931[CHB]; 0.956[CHD]; 0.886[GIH]; 0.85[JPT]; 0.91[MEX]; 0.803[TSI]; 0.846[YRI]
|
rs3794808
|
NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
1.0[CHD]; 0.92[JPT]; 0.845[TSI]
|
rs12450441
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs9896012
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant |
0.924[CEU]; 1.0[CHB]; 1.0[CHD]; 0.932[GIH]; 1.0[JPT]; 0.869[MEX]
|
rs34585141
|
NMD_transcript_variant; intron_variant; upstream_gene_variant |
0.908[MEX]
|
rs4239227
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.961[CEU]; 0.847[GIH]; 0.955[MEX]; 0.955[TSI]
|
rs7213076
|
downstream_gene_variant; intron_variant; nc_transcript_variant |
0.887[CEU]; 0.931[CHB]; 0.956[CHD]; 0.886[GIH]; 0.911[MEX]
|
rs9890886
|
NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.961[CEU]; 0.847[GIH]; 0.91[MEX]; 0.932[TSI]
|
rs4533341
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.955[MEX]; 0.977[TSI]
|