ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1048953 dbSNP Ensembl
Location Chr5:1438174(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000453492; ENST00000270349; ENST00000513308)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Genro JP, 2008 C/T P-value=0.735 for total sample; P-value=0.522 for combined s...... P-value=0.735 for total sample; P-value=0.522 for combined sample More... no allele was significantly more transmitted than expected no allele was significantly more transmitted than expected Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1048953 (count: 13) View in gBrowse (chr5:1390349..1550734 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 13)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014