ADHDgene Database
  • Hot Results
  • Quick Search
Keyword:
Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1050567 dbSNP Ensembl
Location Chr2:61705663(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation 3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; nc_transcript_variant; non_coding_exon_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000404992; ENST00000401558; ENST00000428210)
NMD_transcript_variant(ENST00000428210)
downstream_gene_variant(ENST00000406957; ENST00000461407; ENST00000492182)
nc_transcript_variant(ENST00000481073)
non_coding_exon_variant(ENST00000481073)
No. of Studies 1 (significant: 0; non-significant: 0; trend: 1)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Stergiakouli E., 2012 T/C T P=0.0000289, OR=1.44, 95% CI=1.22-1.72 P=0.0000289, OR=1.44, 95% CI=1.22-1.72 One of the top 36 independent SNP in this ADHD GWAS. One of the top 36 independent SNP in this ADHD GWAS. Trend

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1050567 (count: 18) View in gBrowse (chr2:61512760..61780230 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 18)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014