ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs12331962 dbSNP Ensembl
Location Chr4:20714769(Fwd)
Variant Alleles A/G
Ancestral Allele A
Functional Annotation NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant.
Consequence to Transcript NMD_transcript_variant(ENST00000471979; ENST00000506951; ENST00000506702; ENST00000467997; ENST00000503747; ENST00000508952)
downstream_gene_variant(ENST00000506457; ENST00000514663; ENST00000509469; ENST00000514485)
intron_variant(ENST00000471979; ENST00000503585; ENST00000467997; ENST00000538990; ENST00000513459; ENST00000511089; ENST00000513590; ENST00000502374; ENST00000360916; ENST00000506951; ENST00000506552; ENST00000513861; ENST00000502938; ENST00000444671; ENST00000506702; ENST00000295290; ENST00000510051; ENST00000507634; ENST00000515339; ENST00000514292; ENST00000503747; ENST00000508952)
nc_transcript_variant(ENST00000506648; ENST00000506552)
non_coding_exon_variant(ENST00000506648)
No. of Studies 0 (significant: 0; non-significant: 0; trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 1)


SNPs in LD with rs12331962 (count: 1) View in gBrowse (chr4:20714769..20730780 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014