ADHDgene Database

SNP Report

Basic Info

Name	rs12596924 dbSNP Ensembl
Location	Chr16:55744647(Fwd)
Variant Alleles	T/G
Functional Annotation	downstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000219833; ENST00000574918)
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Kim JW, 2008			X²=0.014, P-value=0.906, OR=1.01 X²=0.014, P-value=0.906, OR=1.01	not associated with ADHD not associated with ADHD	Non-significant

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SLC6A2	solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	16q12.2	16(10/5/1)
NET1	neuroepithelial cell transforming 1	10p15	0

SNPs in LD with rs12596924 (count: 22) View in gBrowse (chr16:55734699..55785700 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs9935499	downstream_gene_variant	0.895[JPT]
rs36006	3_prime_UTR_variant; downstream_gene_variant	0.908[JPT]
rs168922	upstream_gene_variant	0.91[JPT]
rs187712	upstream_gene_variant	0.822[JPT]
rs4784568	downstream_gene_variant	0.822[JPT]
rs36005	downstream_gene_variant	0.908[JPT]
rs7192610	intron_variant; nc_transcript_variant	0.822[JPT]
rs8059401	intron_variant; nc_transcript_variant	0.819[JPT]
rs171798	downstream_gene_variant	1.0[CEU]; 0.93[CHB]; 1.0[JPT]
rs258102	downstream_gene_variant	0.91[JPT]
rs4106010	intron_variant; nc_transcript_variant	0.82[JPT]
rs42879	3_prime_UTR_variant; downstream_gene_variant	0.91[JPT]
rs4784567	downstream_gene_variant	0.822[JPT]
rs11867070	intron_variant; nc_transcript_variant	0.822[JPT]
rs9921916	intron_variant; nc_transcript_variant	0.809[JPT]
rs6499780	intron_variant; nc_transcript_variant	0.82[JPT]
rs7500030	intron_variant; nc_transcript_variant	0.822[JPT]
rs2134253	intron_variant; nc_transcript_variant	0.82[JPT]
rs9788954	intron_variant; nc_transcript_variant	0.82[JPT]
rs36008	intron_variant	0.908[JPT]
rs9927859	downstream_gene_variant	0.895[JPT]
rs258101	downstream_gene_variant	0.91[JPT]