SNP Report
Basic Info
Name |
rs12596924
dbSNP
Ensembl
|
Location |
Chr16:55744647(Fwd) |
Variant Alleles |
T/G |
Functional Annotation |
downstream_gene_variant.
|
Consequence to Transcript |
downstream_gene_variant(ENST00000219833; ENST00000574918) |
No. of Studies |
1 (significant: 0; non-significant: 1; trend: 0) |
Source |
Literature-origin
|
SNP related studies (count: 1)
SNP related genes (count: 2)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 22)
rs_ID |
Functional Annotation |
r2[population] |
rs9935499
|
downstream_gene_variant |
0.895[JPT]
|
rs36006
|
3_prime_UTR_variant; downstream_gene_variant |
0.908[JPT]
|
rs168922
|
upstream_gene_variant |
0.91[JPT]
|
rs187712
|
upstream_gene_variant |
0.822[JPT]
|
rs4784568
|
downstream_gene_variant |
0.822[JPT]
|
rs36005
|
downstream_gene_variant |
0.908[JPT]
|
rs7192610
|
intron_variant; nc_transcript_variant |
0.822[JPT]
|
rs8059401
|
intron_variant; nc_transcript_variant |
0.819[JPT]
|
rs171798
|
downstream_gene_variant |
1.0[CEU]; 0.93[CHB]; 1.0[JPT]
|
rs258102
|
downstream_gene_variant |
0.91[JPT]
|
rs4106010
|
intron_variant; nc_transcript_variant |
0.82[JPT]
|
rs42879
|
3_prime_UTR_variant; downstream_gene_variant |
0.91[JPT]
|
rs4784567
|
downstream_gene_variant |
0.822[JPT]
|
rs11867070
|
intron_variant; nc_transcript_variant |
0.822[JPT]
|
rs9921916
|
intron_variant; nc_transcript_variant |
0.809[JPT]
|
rs6499780
|
intron_variant; nc_transcript_variant |
0.82[JPT]
|
rs7500030
|
intron_variant; nc_transcript_variant |
0.822[JPT]
|
rs2134253
|
intron_variant; nc_transcript_variant |
0.82[JPT]
|
rs9788954
|
intron_variant; nc_transcript_variant |
0.82[JPT]
|
rs36008
|
intron_variant |
0.908[JPT]
|
rs9927859
|
downstream_gene_variant |
0.895[JPT]
|
rs258101
|
downstream_gene_variant |
0.91[JPT]
|