ADHDgene Database

SNP Report

Basic Info

Name	rs12628032 dbSNP Ensembl
Location	Chr22:19967980(Fwd)
Variant Alleles	C/T
Ancestral Allele	C
Functional Annotation	downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000467828; ENST00000492625; ENST00000487793; ENST00000462319) intron_variant(ENST00000406259; ENST00000344269; ENST00000263207; ENST00000401994; ENST00000406522) nc_transcript_variant(ENST00000473551) non_coding_exon_variant(ENST00000473551) upstream_gene_variant(ENST00000480792; ENST00000495096)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
ARVCF	armadillo repeat gene deleted in velocardiofacial syndrome	22q11.21	1(1/0/0)

SNPs in LD with rs12628032 (count: 2) View in gBrowse (chr22:19967980..19969106 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2240717	downstream_gene_variant; missense_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant	1(0/1/0)	1.0[JPT]
rs2073748	downstream_gene_variant; missense_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant	1(0/1/0)	0.825[CHB]; 1.0[JPT]