ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs12947084 dbSNP Ensembl
Location Chr17:28502363(Fwd)
Variant Alleles T/C
Ancestral Allele T
Functional Annotation NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript NMD_transcript_variant(ENST00000394826; ENST00000475652; ENST00000584154; ENST00000584317; ENST00000589608)
downstream_gene_variant(ENST00000467446)
intron_variant(ENST00000577289; ENST00000588614; ENST00000581048; ENST00000394826; ENST00000475652; ENST00000584154; ENST00000584317; ENST00000247026; ENST00000580103; ENST00000585881; ENST00000540900; ENST00000589608)
nc_transcript_variant(ENST00000577289; ENST00000581048; ENST00000540900)
No. of Studies 0 (significant: 0; non-significant: 0; trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 1)


SNPs in LD with rs12947084 (count: 1) View in gBrowse (chr17:28502363..28529242 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014