ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1304358 dbSNP Ensembl
Location Chr2:198969583(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation NMD_transcript_variant; intron_variant.
Consequence to Transcript NMD_transcript_variant(ENST00000435320)
intron_variant(ENST00000437704; ENST00000487695; ENST00000435320; ENST00000428675)
No. of Studies 1 (significant: 0; non-significant: 0; trend: 1)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Stergiakouli E., 2012 C/T C P=0.0000127, OR=1.3, 95% CI=1.16-1.47 P=0.0000127, OR=1.3, 95% CI=1.16-1.47 One of the top 29 independent SNP in this ADHD GWAS. One of the top 29 independent SNP in this ADHD GWAS. Trend

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1304358 (count: 15) View in gBrowse (chr2:198959372..198979763 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 15)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014