SNP Report
Basic Info
Name |
rs13330107
dbSNP
Ensembl
|
Location |
Chr16:76878862(Fwd) |
Variant Alleles |
G/A |
Ancestral Allele |
G |
Functional Annotation |
intron_variant; nc_transcript_variant.
|
Consequence to Transcript |
intron_variant(ENST00000567777) nc_transcript_variant(ENST00000567777) |
No. of Studies |
1 (significant: 0; non-significant: 0; trend: 1) |
Source |
Literature-origin
|
SNP related studies (count: 1)
SNP related genes (count: 0)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 12)
rs_ID |
Functional Annotation |
r2[population] |
rs4439773
|
intron_variant; nc_transcript_variant |
0.905[CHB]; 0.819[JPT]
|
rs1390900
|
intron_variant; nc_transcript_variant |
0.853[CHB]; 0.819[JPT]
|
rs8062765
|
intron_variant; nc_transcript_variant |
0.821[CHB]
|
rs7196352
|
intron_variant; nc_transcript_variant |
0.889[YRI]
|
rs8044286
|
intron_variant; nc_transcript_variant |
0.887[CHB]; 0.8[JPT]
|
rs4513114
|
intron_variant; nc_transcript_variant; upstream_gene_variant |
0.819[JPT]
|
rs8048286
|
intron_variant; nc_transcript_variant |
0.819[JPT]
|
rs2220985
|
intron_variant; nc_transcript_variant |
0.821[CHB]
|
rs1021593
|
intron_variant; nc_transcript_variant; upstream_gene_variant |
0.821[CHB]
|
rs1319365
|
intron_variant; nc_transcript_variant |
0.889[YRI]
|
rs1874535
|
intron_variant; nc_transcript_variant |
0.862[CHB]
|
rs1390902
|
intron_variant; nc_transcript_variant |
0.862[CHB]
|