ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

SNP Report

Basic Info

Name	rs1370072 dbSNP Ensembl
Location	Chr13:55841938(Fwd)
Variant Alleles	C/T
Ancestral Allele	C
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Stergiakouli E., 2012	T/C	T	P=0.0000328, OR=1.29, 95% CI=1.14-1.45 P=0.0000328, OR=1.29, 95% CI=1.14-1.45	One of the top 38 independent SNP in this ADHD GWAS. One of the top 38 independent SNP in this ADHD GWAS.	Trend

SNP related genes (count: 0)

SNPs in LD with rs1370072 (count: 56) View in gBrowse (chr13:55679154..55903477 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 56)

rs_ID	Functional Annotation	r²[population]
rs1370073		1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
rs2316652		1.0[CEU]; 0.946[CHB]; 0.86[JPT]
rs4344605		1.0[CEU]; 0.946[CHB]; 0.89[CHD]; 0.972[GIH]; 0.937[JPT]; 0.913[MEX]; 1.0[TSI]
rs3118186		1.0[CEU]; 0.946[CHB]; 0.871[JPT]
rs7990319		0.88[CEU]; 0.946[CHB]; 0.888[CHD]; 0.972[GIH]; 0.937[JPT]; 0.818[LWK]; 0.867[MEX]; 1.0[TSI]
rs9537036		0.961[CEU]; 1.0[CHB]; 1.0[JPT]
rs9527354		0.961[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
rs9537015		0.937[JPT]
rs1578051		1.0[CEU]; 0.946[CHB]; 0.89[CHD]; 0.972[GIH]; 0.937[JPT]; 0.818[LWK]; 0.957[MEX]; 1.0[TSI]
rs1583560		1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
rs3118190		1.0[CEU]
rs9537008		1.0[CEU]; 0.946[CHB]; 0.808[JPT]
rs9316768		1.0[CEU]; 0.945[CHB]; 0.931[JPT]
rs1582147		1.0[CEU]; 0.946[CHB]; 0.89[CHD]; 0.972[GIH]; 0.937[JPT]; 1.0[LWK]; 0.957[MEX]; 0.817[MKK]; 1.0[TSI]
rs3120867		1.0[CEU]; 0.946[CHB]; 0.937[JPT]
rs7982019		0.942[CHB]; 0.837[JPT]
rs1416332		1.0[CEU]; 0.946[CHB]; 0.876[JPT]
rs7336884		1.0[CEU]; 0.941[CHB]; 0.929[JPT]
rs3120881		1.0[CEU]; 0.946[CHB]; 0.89[CHD]; 0.972[GIH]; 0.937[JPT]; 1.0[LWK]; 0.956[MEX]; 0.812[MKK]; 1.0[TSI]
rs2575907		1.0[CEU]; 0.943[GIH]; 0.977[TSI]
rs9316770		1.0[CEU]; 0.945[CHB]; 0.937[JPT]
rs3118195		0.958[CEU]
rs2316642		1.0[CEU]
rs7998111		1.0[CEU]; 0.946[CHB]; 0.888[CHD]; 0.94[GIH]; 0.935[JPT]; 1.0[LWK]; 0.957[MEX]; 1.0[TSI]
rs9569240		1.0[CEU]; 0.946[CHB]; 0.89[CHD]; 0.972[GIH]; 0.937[JPT]; 1.0[LWK]; 0.957[MEX]; 1.0[TSI]
rs7490613		1.0[CEU]; 0.946[CHB]; 0.937[JPT]
rs4583111		0.94[CHB]
rs2575898		1.0[CEU]; 0.946[CHB]; 0.861[CHD]; 0.972[GIH]; 0.937[JPT]; 0.818[LWK]; 0.955[MEX]; 1.0[TSI]
rs641385		1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 1.0[LWK]; 1.0[MEX]; 1.0[MKK]; 1.0[TSI]; 1.0[YRI]
rs652683		1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.818[LWK]; 0.957[MEX]; 1.0[TSI]
rs2788704		1.0[CEU]; 0.946[CHB]; 0.876[JPT]
rs3120874		1.0[CEU]; 0.946[CHB]; 0.937[JPT]
rs3125765		0.946[CHB]; 0.881[JPT]
rs9537011		1.0[CEU]; 0.946[CHB]; 0.886[CHD]; 0.972[GIH]; 0.937[JPT]; 0.91[MEX]; 1.0[TSI]
rs9527340		1.0[CEU]; 1.0[CHB]; 0.919[CHD]; 1.0[GIH]; 0.937[JPT]; 0.818[LWK]; 1.0[MEX]; 1.0[TSI]
rs3118184		1.0[CEU]; 0.946[CHB]; 0.89[CHD]; 0.945[GIH]; 0.881[JPT]; 0.818[LWK]; 0.957[MEX]; 1.0[TSI]
rs3125759		1.0[CEU]; 0.945[CHB]; 0.875[JPT]
rs2788706		0.937[CHB]; 0.907[JPT]
rs10781824		1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 1.0[LWK]; 1.0[MEX]; 1.0[MKK]; 1.0[TSI]; 1.0[YRI]
rs9316772		1.0[CEU]; 1.0[CHB]; 0.919[CHD]; 0.937[JPT]; 0.889[LWK]; 0.976[TSI]
rs2316648		1.0[CEU]; 0.879[CHB]; 0.932[JPT]
rs1578052		1.0[CEU]; 0.946[CHB]; 0.937[JPT]
rs3120855		1.0[CEU]; 0.946[CHB]; 0.937[JPT]
rs3120890		1.0[CEU]; 0.946[CHB]; 0.89[CHD]; 0.972[GIH]; 0.937[JPT]; 1.0[LWK]; 0.957[MEX]; 0.817[MKK]; 1.0[TSI]
rs9537018		1.0[CEU]; 0.946[CHB]; 0.881[JPT]
rs2217929		1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 1.0[LWK]; 1.0[MEX]; 1.0[MKK]; 1.0[TSI]; 1.0[YRI]
rs9537010		1.0[CEU]; 0.946[CHB]; 0.935[JPT]
rs2575906		1.0[CEU]; 0.946[CHB]; 0.937[JPT]
rs7995821		0.932[JPT]
rs3120868		1.0[CEU]; 0.946[CHB]; 0.89[CHD]; 0.972[GIH]; 0.937[JPT]; 1.0[LWK]; 0.957[MEX]; 0.812[MKK]; 1.0[TSI]
rs3118194		0.939[CHB]; 0.906[JPT]
rs9537001		1.0[CEU]; 0.946[CHB]; 0.889[CHD]; 0.972[GIH]; 0.881[JPT]; 0.818[LWK]; 0.957[MEX]; 1.0[TSI]
rs1570751		1.0[CEU]; 0.946[CHB]; 0.861[CHD]; 0.972[GIH]; 0.881[JPT]; 0.841[LWK]; 0.957[MEX]; 1.0[TSI]
rs1657207		1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.849[YRI]
rs3120866		1.0[CEU]; 0.946[CHB]; 0.871[JPT]
rs4479118		1.0[CHB]; 1.0[JPT]; 1.0[YRI]