ADHDgene Database

SNP Report

Basic Info

Name	rs1476413 dbSNP Ensembl
Location	Chr1:11852300(Fwd)
Variant Alleles	C/T
Ancestral Allele	C
Functional Annotation	downstream_gene_variant; intron_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000482358; ENST00000433342; ENST00000444493; ENST00000475041; ENST00000312793; ENST00000449278) intron_variant(ENST00000376583; ENST00000376585; ENST00000376592; ENST00000376590)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
MTHFR	methylenetetrahydrofolate reductase (NAD(P)H)	1p36.3	1(0/1/0)

Approved Symbol	Approved Name	Location
LOC100506310	uncharacterized protein C1orf167-like [MODEL Refseq, protein coding]	1p36
C1orf167	chromosome 1 open reading frame 167	1p36.22

SNPs in LD with rs1476413 (count: 1) View in gBrowse (chr1:11852300..11854476 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs1801131	downstream_gene_variant; missense_variant	1(0/1/0)	1.0[CHB]; 0.898[CHD]; 0.927[LWK]; 0.88[MEX]; 0.895[MKK]; 1.0[YRI]