ADHDgene Database

SNP Report

Basic Info

Name	rs17023218 dbSNP Ensembl
Location	Chr3:29342717(Fwd)
Variant Alleles	C/A
Ancestral Allele	C
Functional Annotation	intron_variant; nc_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000434693; ENST00000383767; ENST00000445033; ENST00000471426; ENST00000383766; ENST00000273139; ENST00000452462; ENST00000456853; ENST00000396583) nc_transcript_variant(ENST00000471426)
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Mick E, 2010		A	TDT P-value=1.88E-05 (OR=0.68) TDT P-value=1.88E-05 (OR=0.68)	One of the top 20 associations from genome-wide association ...... One of the top 20 associations from genome-wide association results More...	Non-significant

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
RBMS3	RNA binding motif, single stranded interacting protein 3	3p24-p23	1(0/1/0)

SNPs in LD with rs17023218 (count: 3) View in gBrowse (chr3:29338610..29347180 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs2196550	intron_variant; nc_transcript_variant	1.0[JPT]
rs13093377	intron_variant; nc_transcript_variant	0.951[CEU]; 0.808[YRI]
rs13076689	intron_variant; nc_transcript_variant	0.95[CEU]