ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs174611 dbSNP Ensembl
Location Chr11:61627881(Fwd)
Variant Alleles T/C
Ancestral Allele T
Functional Annotation intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000257261; ENST00000278840; ENST00000522056; ENST00000521571; ENST00000355484; ENST00000523235; ENST00000521849)
nc_transcript_variant(ENST00000523235)
upstream_gene_variant(ENST00000522359)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Brookes K, 2006 A/G UNPHASED TDT P-value=0.039; WHAP TDT P-value=0.076 UNPHASED TDT P-value=0.039; WHAP TDT P-value=0.076 significant association was observed in UNPHASED analysis significant association was observed in UNPHASED analysis Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs174611 (count: 13) View in gBrowse (chr11:61549458..61640198 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 13)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014