ADHDgene Database

SNP Report

Basic Info

Name	rs174699 dbSNP Ensembl
Location	Chr22:19954458(Fwd)
Variant Alleles	C/T
Ancestral Allele	T
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000207636) downstream_gene_variant(ENST00000406259; ENST00000585066; ENST00000493893; ENST00000344269; ENST00000403184; ENST00000401994; ENST00000406522; ENST00000467943; ENST00000495096; ENST00000263207) intron_variant(ENST00000403710; ENST00000449653; ENST00000428707; ENST00000361682; ENST00000207636; ENST00000407537; ENST00000406520; ENST00000412786)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
COMT	catechol-O-methyltransferase	22q11.21	25(5/20/0)
ARVCF	armadillo repeat gene deleted in velocardiofacial syndrome	22q11.21	1(1/0/0)

Approved Symbol	Approved Name	Location
MIR4761	microRNA 4761	22

SNPs in LD with rs174699 (count: 1) View in gBrowse (chr22:19954458..19957023 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs165728	3_prime_UTR_variant; downstream_gene_variant	1(0/1/0)	1.0[CHB]; 0.952[CHD]; 0.847[GIH]; 0.897[JPT]; 0.944[MEX]; 1.0[TSI]