SNP Report
Basic Info
Name |
rs1859063
dbSNP
Ensembl
|
Location |
Chr2:130363731(Fwd) |
Variant Alleles |
T/C |
Ancestral Allele |
T |
No. of Studies |
1 (significant: 0; non-significant: 1; trend: 0) |
Source |
Literature-origin
|
SNP related studies (count: 1)
SNP related genes (count: 1)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 21)
rs_ID |
Functional Annotation |
r2[population] |
rs3108986
|
|
1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 0.946[CHD]; 1.0[GIH]; 1.0[JPT]; 0.856[LWK]; 0.878[MEX]
|
rs3094425
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.814[YRI]
|
rs3109308
|
|
1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 0.927[JPT]; 0.856[LWK]; 1.0[MEX]; 0.851[YRI]
|
rs1859062
|
|
0.888[CHB]; 0.944[CHD]; 0.961[GIH]; 0.805[JPT]; 0.865[MEX]
|
rs17049589
|
|
0.877[CHB]; 0.85[JPT]
|
rs3109303
|
|
1.0[CEU]
|
rs3109305
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.817[YRI]
|
rs3109306
|
|
1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.856[LWK]; 1.0[MEX]; 0.817[YRI]
|
rs4662968
|
|
1.0[CHB]; 1.0[JPT]
|
rs13391055
|
|
1.0[CEU]
|
rs17049621
|
|
0.875[CHB]; 0.853[JPT]
|
rs3109015
|
|
0.888[CHB]; 0.944[CHD]; 0.865[MEX]
|
rs2406989
|
|
1.0[CHB]; 1.0[JPT]
|
rs17049620
|
|
1.0[CHB]; 1.0[CHD]; 0.923[GIH]; 1.0[JPT]
|
rs3108988
|
|
1.0[CEU]
|
rs17049608
|
|
1.0[CHB]; 1.0[CHD]; 0.961[GIH]; 1.0[JPT]; 0.865[MEX]
|
rs4662967
|
|
1.0[CHB]; 1.0[JPT]
|
rs13412058
|
|
1.0[CEU]
|
rs916800
|
|
1.0[CHB]; 1.0[JPT]
|
rs17049591
|
|
0.927[JPT]
|
rs17049594
|
|
1.0[CHB]; 1.0[JPT]
|