ADHDgene Database

SNP Report

Basic Info

Name	rs1895689 dbSNP Ensembl
Location	Chr18:11752943(Fwd)
Variant Alleles	C/A
Ancestral Allele	C
Functional Annotation	intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000535121; ENST00000334049; ENST00000423027; ENST00000585642; ENST00000269162; ENST00000590972) nc_transcript_variant(ENST00000590972) upstream_gene_variant(ENST00000590228)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
GNAL	guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	18p11.22-p11.21	1(1/0/0)

SNPs in LD with rs1895689 (count: 3) View in gBrowse (chr18:11752943..11774500 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2161961	intron_variant; nc_transcript_variant	1(1/0/0)	0.819[CHB]
rs2052661	intron_variant; nc_transcript_variant	1(0/1/0)	0.949[CHB]; 0.939[JPT]
rs8095592	intron_variant; nc_transcript_variant	1(0/1/0)	1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[JPT]; 0.857[LWK]; 1.0[TSI]; 0.86[YRI]