ADHDgene Database

SNP Report

Basic Info

Name	rs1979311 dbSNP Ensembl
Location	Chr5:71407890(Fwd)
Variant Alleles	T/G
Ancestral Allele	G
Functional Annotation	NMD_transcript_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000513526) intron_variant(ENST00000296755; ENST00000513526; ENST00000504183; ENST00000512974; ENST00000511641) nc_transcript_variant(ENST00000504183)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
MAP1B	microtubule-associated protein 1B	5q13	1(0/0/1)

SNPs in LD with rs1979311 (count: 1) View in gBrowse (chr5:71407890..71410356 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2199161	NMD_transcript_variant; intron_variant; nc_transcript_variant	1(0/0/1)	1.0[CEU]; 1.0[CHB]; 0.952[JPT]; 1.0[YRI]