ADHDgene Database

Hot Results

Quick Search

Keyword:
Type:

Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

SNP Report

Basic Info

Name	rs200173 dbSNP Ensembl
Location	Chr17:37825089(Fwd)
Variant Alleles	A/G
Ancestral Allele	G
Functional Annotation	downstream_gene_variant; intron_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000309862; ENST00000577337; ENST00000429199; ENST00000580898; ENST00000579146; ENST00000378011; ENST00000300658; ENST00000309889; ENST00000578283) intron_variant(ENST00000269582; ENST00000581428; ENST00000394246)
No. of Studies	2 (significant: 2; non-significant: 0; trend: 0)
Source	Literature-origin

SNP related studies (count: 2)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Oades RD, 2008			P-value=0.003818; FDR P-value=0.00936 in additive model for ...... P-value=0.003818; FDR P-value=0.00936 in additive model for cognitive impulsivity; P-value=0.00468; FDR P-value=0.00936 in dominant model More...	attained gene-wide statistical significance following an FDR...... attained gene-wide statistical significance following an FDR correction for multiple testing More...	Significant
Brookes K, 2006	A/G		UNPHASED TDT P-value=0.012; WHAP TDT P-value=0.034 UNPHASED TDT P-value=0.012; WHAP TDT P-value=0.034	significant association was observed in both UNPHASED and WH...... significant association was observed in both UNPHASED and WHAP analyses More...	Significant

SNP related genes (count: 4)

Literature-origin genes (count: 1)

Genes from other sources (count: 3)

Approved Symbol	Approved Name	Location
STARD3	StAR-related lipid transfer (START) domain containing 3	17q11-q12
PGAP3	post-GPI attachment to proteins 3	17q21.2
TCAP	titin-cap (telethonin)	17q12

SNPs in LD with rs200173 (count: 0) View in gBrowse (chr17:37825089..37825089 )