ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2066713 dbSNP Ensembl
Location Chr17:28551665(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000394821; ENST00000401766; ENST00000261707)
No. of Studies 3 (significant: 1; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 3)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Biederman J, 2008 TDT P-value=0.254 for all; TDT P-value=0.151 for transmissio...... TDT P-value=0.254 for all; TDT P-value=0.151 for transmission to male offspring; TDT P-value=1 for transmission to female offspring; TDT P-value=0.398, X2=0.71 for male versus female transmissions More... they observed no evidence of association either in the full ...... they observed no evidence of association either in the full sample or when stratified by gender More... Non-significant
Nyman ES, 2007 Logistic regression for single markers: adjusted for sex: P-...... Logistic regression for single markers: adjusted for sex: P-value=0.0452, OR=0.54, 95%CI=0.29-0.99 for 12vs.22 More... nominally associated, but the results were considered inconc...... nominally associated, but the results were considered inconclusive because the effect was seen only for heterozygotes, and no risk (or protective) allele could be identified. More... Significant
Ilott NE, 2010 QTDT AT P-value=0.84, X2=0.04, df=1, QTDT AW P-va...... QTDT AT P-value=0.84, X2=0.04, df=1, QTDT AW P-value=1, X2=0, df=11 at age 2; QTDT AT P-value=0.5, X2=1.27, df=1, QTDT AW P-value=0.57, X2=0.32, df=1 at age 3 More... no significant association no significant association Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs2066713 (count: 1) View in gBrowse (chr17:28546914..28551665 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014