SNP Report
Basic Info
SNP related studies (count: 1)
SNP related genes (count: 5)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 9)
rs_ID |
Functional Annotation |
r2[population] |
rs4440544
|
intron_variant; nc_transcript_variant |
0.843[CHB]; 0.915[JPT]
|
rs4517031
|
intron_variant; nc_transcript_variant |
0.843[CHB]; 0.915[JPT]
|
rs2303941
|
downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant |
0.92[CHB]; 0.849[JPT]; 0.863[YRI]
|
rs4725391
|
intron_variant; nc_transcript_variant; upstream_gene_variant |
0.915[JPT]
|
rs4725390
|
intron_variant; nc_transcript_variant; upstream_gene_variant |
0.843[CHB]; 0.915[JPT]
|
rs10279252
|
intron_variant; nc_transcript_variant |
0.843[CHB]; 0.915[JPT]
|
rs4725991
|
intron_variant; nc_transcript_variant |
0.805[CHD]; 0.834[JPT]
|
rs10279150
|
intron_variant; nc_transcript_variant |
0.896[CHB]
|
rs2303940
|
downstream_gene_variant; nc_transcript_variant; non_coding_exon_variant; synonymous_variant |
1.0[CHB]; 1.0[CHD]; 0.849[JPT]; 1.0[MEX]; 0.848[YRI]
|