ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2860025 dbSNP Ensembl
Location Chr5:52114050(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation intron_variant; nc_transcript_variant.
Consequence to Transcript intron_variant(ENST00000504086; ENST00000282588)
nc_transcript_variant(ENST00000504086)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Laurin N, 2008(a) G/A P-value=0.333 in the catergorical analysis, P-value>0.05 in ...... P-value=0.333 in the catergorical analysis, P-value>0.05 in the quantitative analysis More... no significant evidence of association no significant evidence of association Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs2860025 (count: 12) View in gBrowse (chr5:52070449..52119443 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 12)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014