ADHDgene Database

SNP Report

Basic Info

Name	rs2939678 dbSNP Ensembl
Location	Chr8:56247138(Fwd)
Variant Alleles	A/G
Ancestral Allele	A
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000327381)
No. of Studies	2 (significant: 0; non-significant: 2; trend: 0)
Source	Literature-origin

SNP related studies (count: 2)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Neale BM, 2008	A:G		Uncorrected TDT P-value=3.87E-05 (OR=0.7222) Uncorrected TDT P-value=3.87E-05 (OR=0.7222)	One of top 25 results in uncorrected TDT test One of top 25 results in uncorrected TDT test	Non-significant
Lantieri F, 2010	A:G		Binomial P-value=0.05, OR=0.82 for whole sample; Binomial P-...... Binomial P-value=0.05, OR=0.82 for whole sample; Binomial P-value=0.3, OR=0.91 for C-subtype More...	significant in this sample, but not significant after correc...... significant in this sample, but not significant after correction for multiple tests More...	Non-significant

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
XKR4	XK, Kell blood group complex subunit-related family, member 4	8q12.1	1(1/0/0)

SNPs in LD with rs2939678 (count: 1) View in gBrowse (chr8:56229879..56247138 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.