SNP Report
Basic Info
SNP related studies (count: 1)
SNP related genes (count: 1)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 19)
rs_ID |
Functional Annotation |
r2[population] |
rs10025434
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
1.0[CEU]
|
rs1827593
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.918[CEU]; 0.814[GIH]
|
rs2340
|
NMD_transcript_variant; intron_variant |
0.855[CEU]
|
rs6847761
|
NMD_transcript_variant; downstream_gene_variant; intron_variant |
0.846[CEU]
|
rs1021863
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.855[CEU]; 0.814[GIH]
|
rs1158161
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.921[CEU]
|
rs1394135
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.855[CEU]
|
rs1394136
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.855[CEU]
|
rs6448062
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.912[CEU]
|
rs2202312
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.918[CEU]
|
rs358830
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.923[CEU]; 0.911[GIH]
|
rs11946639
|
NMD_transcript_variant; intron_variant |
0.912[CEU]; 0.824[YRI]
|
rs10009713
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.923[CEU]; 0.911[GIH]
|
rs358565
|
NMD_transcript_variant; intron_variant |
0.897[CEU]; 0.824[YRI]
|
rs429783
|
NMD_transcript_variant; intron_variant |
0.923[CEU]; 1.0[GIH]; 0.839[TSI]
|
rs6848328
|
NMD_transcript_variant; downstream_gene_variant; intron_variant |
0.923[CEU]
|
rs9994077
|
NMD_transcript_variant; intron_variant |
0.855[CEU]
|
rs11730697
|
NMD_transcript_variant; intron_variant; nc_transcript_variant |
0.923[CEU]; 0.814[GIH]
|
rs10006027
|
NMD_transcript_variant; intron_variant |
0.855[CEU]
|