ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs358834 dbSNP Ensembl
Location Chr4:21549850(Fwd)
Variant Alleles C/T
Ancestral Allele T
Functional Annotation NMD_transcript_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript NMD_transcript_variant(ENST00000515786)
intron_variant(ENST00000382148; ENST00000447367; ENST00000382152; ENST00000515786)
upstream_gene_variant(ENST00000509207)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Weissflog L., 2012 family based test in childhood ADHD sample: p=0.0411 family based test in childhood ADHD sample: p=0.0411 This SNP indicated a nominally significant association with ...... This SNP indicated a nominally significant association with cADHD. More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs358834 (count: 19) View in gBrowse (chr4:21512910..21631108 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 19)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014