ADHDgene Database

SNP Report

Basic Info

Name	rs3763613 dbSNP Ensembl
Location	Chr9:34584319(Fwd)
Variant Alleles	G/T
Ancestral Allele	G
Functional Annotation	downstream_gene_variant; intron_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000438244; ENST00000453642; ENST00000436360) intron_variant(ENST00000351266; ENST00000378980; ENST00000417345)
No. of Studies	1 (significant: 1; non-significant: 0; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Ribases M, 2008			genotypic P-value=0.004; genotypic P-value=0.01, OR=1.54 (1....... genotypic P-value=0.004; genotypic P-value=0.01, OR=1.54 (1.10-2.13) in dominant model; genotypic P-value=0.2 in recessive model; allelic P-value=0.094 in Adults More...	provided evidence of association with adulthood ADHD provided evidence of association with adulthood ADHD	Significant

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
CNTFR	ciliary neurotrophic factor receptor	9p13	1(1/0/0)

SNPs in LD with rs3763613 (count: 6) View in gBrowse (chr9:34584319..34637991 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.


rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]
rs7036351	upstream_gene_variant	1(1/0/0)	0.834[ASW]; 0.946[CHB]; 1.0[CHD]; 1.0[JPT]

rs_ID	Functional Annotation	r²[population]
rs3802427	NMD_transcript_variant; downstream_gene_variant; intron_variant; upstream_gene_variant	0.834[ASW]; 0.84[CHB]; 0.974[CHD]; 1.0[JPT]
rs10814129	intron_variant; splice_region_variant; upstream_gene_variant	0.834[ASW]; 0.84[CHB]; 0.974[CHD]; 0.937[JPT]
rs11791806	downstream_gene_variant; upstream_gene_variant	0.84[CHB]; 0.948[CHD]; 0.937[JPT]
rs10814130	upstream_gene_variant	0.921[CHD]; 0.87[JPT]
rs16931689	downstream_gene_variant	0.84[CHB]; 1.0[JPT]