ADHDgene Database

SNP Report

Basic Info

Name	rs3793371 dbSNP Ensembl
Location	Chr8:144664299(Fwd)
Variant Alleles	G/A
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000533833; ENST00000524397; ENST00000529007; ENST00000530616) downstream_gene_variant(ENST00000525695; ENST00000529247; ENST00000531931; ENST00000532543; ENST00000525223; ENST00000526340; ENST00000531730) intron_variant(ENST00000524624; ENST00000533749; ENST00000533833; ENST00000524397; ENST00000526786; ENST00000534380; ENST00000528382; ENST00000529007; ENST00000395119; ENST00000529272; ENST00000531621; ENST00000534377; ENST00000532400; ENST00000530848; ENST00000419152; ENST00000529516; ENST00000530445; ENST00000533494; ENST00000526838; ENST00000530191; ENST00000532741; ENST00000528610; ENST00000533204; ENST00000442189; ENST00000317198; ENST00000534232; ENST00000531218; ENST00000530616; ENST00000423316) nc_transcript_variant(ENST00000526786; ENST00000530848; ENST00000534232; ENST00000527741) non_coding_exon_variant(ENST00000527741) upstream_gene_variant(ENST00000435154; ENST00000449291; ENST00000276844; ENST00000462059; ENST00000491904; ENST00000426292; ENST00000488096; ENST00000480946; ENST00000532645; ENST00000525583; ENST00000530109; ENST00000529576; ENST00000340490)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
NAPRT1	nicotinate phosphoribosyltransferase domain containing 1	8q24.3	1(0/0/1)

Approved Symbol	Approved Name	Location
EEF1D	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	8q24

SNPs in LD with rs3793371 (count: 1) View in gBrowse (chr8:144657600..144664299 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2290416	downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; synonymous_variant; upstream_gene_variant	1(0/0/1)	1.0[ASW]; 0.899[CEU]; 0.808[CHD]; 0.823[JPT]; 1.0[YRI]