ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

SNP Report

Basic Info

Name	rs406742 dbSNP Ensembl
Location	Chr10:8845941(Fwd)
Variant Alleles	A/G
Ancestral Allele	G
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Stergiakouli E., 2012	G/A	G	P=0.0000149, OR=1.33, 95% CI=1.17-1.51 P=0.0000149, OR=1.33, 95% CI=1.17-1.51	One of the top 30 independent SNP in this ADHD GWAS. One of the top 30 independent SNP in this ADHD GWAS.	Trend

SNP related genes (count: 0)

SNPs in LD with rs406742 (count: 22) View in gBrowse (chr10:8780484..8855244 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 22)

rs_ID	Functional Annotation	r²[population]
rs7069425		1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs11255937		1.0[CEU]; 1.0[CHB]; 0.972[CHD]; 1.0[GIH]; 1.0[JPT]; 0.953[MEX]; 0.976[TSI]
rs7912638		0.852[GIH]
rs11255920		0.906[GIH]; 0.812[TSI]
rs12573107		1.0[CEU]; 1.0[CHB]; 0.972[CHD]; 1.0[GIH]; 1.0[JPT]; 1.0[MEX]; 0.976[TSI]
rs1334557		0.837[GIH]
rs1334539		1.0[CEU]; 1.0[CHB]; 0.916[CHD]; 1.0[GIH]; 0.906[JPT]; 0.859[MEX]; 0.976[TSI]
rs11255929		1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs12220656		0.852[GIH]
rs2025758		0.952[JPT]
rs913104		1.0[CEU]; 1.0[CHB]; 0.972[CHD]; 1.0[GIH]; 1.0[JPT]; 0.953[MEX]; 0.976[TSI]
rs12220668		0.852[GIH]
rs7091279		0.945[CEU]; 1.0[CHB]; 0.971[CHD]; 1.0[GIH]; 1.0[JPT]; 1.0[MEX]; 0.976[TSI]
rs7071899		0.86[GIH]
rs3897990		0.86[GIH]
rs17502419		0.906[GIH]; 0.812[TSI]
rs7914614		0.879[GIH]
rs7902431		0.806[TSI]
rs11255928		1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs720507		1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs10905466		1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs1577218		0.886[GIH]; 0.952[JPT]