SNP Report
Basic Info
Name |
rs4238186
dbSNP
Ensembl
|
Location |
Chr13:19690836(Fwd) |
Variant Alleles |
G/A |
Ancestral Allele |
G |
No. of Studies |
1 (significant: 0; non-significant: 0; trend: 1) |
Source |
Literature-origin
|
SNP related studies (count: 1)
SNP related genes (count: 2)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 26)
rs_ID |
Functional Annotation |
r2[population] |
rs9581286
|
|
1.0[CEU]; 1.0[CHB]; 0.945[JPT]
|
rs9581223
|
|
1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 0.968[CHD]; 0.972[GIH]; 1.0[JPT]; 1.0[LWK]; 1.0[MEX]; 0.985[MKK]; 1.0[TSI]; 1.0[YRI]
|
rs9578807
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.865[YRI]
|
rs7331049
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs8000614
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs7987092
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs7328859
|
|
1.0[CEU]; 1.0[CHB]; 0.968[CHD]; 0.891[GIH]; 1.0[JPT]; 0.848[MEX]; 0.945[TSI]
|
rs7328641
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs17090507
|
|
0.89[JPT]
|
rs7983354
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.962[YRI]
|
rs9581256
|
|
1.0[CEU]; 1.0[CHB]; 0.935[JPT]
|
rs17071862
|
|
0.937[CHD]; 0.89[JPT]
|
rs9581221
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs9581229
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs4770762
|
|
0.89[JPT]
|
rs17071834
|
|
0.922[CEU]; 0.811[CHB]; 0.968[CHD]; 0.972[GIH]; 1.0[JPT]; 0.942[MEX]; 1.0[YRI]
|
rs7990668
|
|
1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 0.968[CHD]; 0.972[GIH]; 1.0[JPT]; 0.977[LWK]; 1.0[MEX]; 0.985[MKK]; 1.0[TSI]; 1.0[YRI]
|
rs7318598
|
|
1.0[CEU]; 1.0[CHB]; 0.915[JPT]; 0.878[YRI]
|
rs7319565
|
|
1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 0.968[CHD]; 0.971[GIH]; 0.977[LWK]; 1.0[MEX]; 0.985[MKK]; 1.0[TSI]; 1.0[YRI]
|
rs17069102
|
|
0.937[CHD]; 0.89[JPT]
|
rs9581228
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs8000394
|
|
1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 0.968[CHD]; 0.972[GIH]; 1.0[JPT]; 0.977[LWK]; 1.0[MEX]; 0.985[MKK]; 1.0[TSI]; 1.0[YRI]
|
rs6491024
|
|
0.812[CHB]
|
rs7991406
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs12869644
|
|
0.931[ASW]
|
rs7983507
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]
|