ADHDgene Database

SNP Report

Basic Info

Name	rs438259 dbSNP Ensembl
Location	Chr6:9030336(Fwd)
Variant Alleles	G/A
Ancestral Allele	G
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Mick E, 2010		A	TDT P-value=3.71E-06 (OR=1.49) TDT P-value=3.71E-06 (OR=1.49)	One of the top 20 associations from genome-wide association ...... One of the top 20 associations from genome-wide association results; annotated by GWAS Catalog More...	Trend

SNP related genes (count: 0)

SNPs in LD with rs438259 (count: 7) View in gBrowse (chr6:9022100..9032138 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs380915		0.837[JPT]
rs382323		0.837[JPT]
rs429460		1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.878[YRI]
rs11243295		1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 0.975[CHD]; 0.806[GIH]; 1.0[JPT]; 0.89[LWK]; 1.0[MEX]; 0.965[MKK]; 1.0[TSI]; 0.881[YRI]
rs84647		0.832[JPT]
rs433603		0.891[CHB]; 0.878[JPT]; 0.832[YRI]
rs421424		0.815[TSI]