ADHDgene Database

SNP Report

Basic Info

Name	rs47958 dbSNP Ensembl
Location	Chr16:55726462(Fwd)
Variant Alleles	C/A
Ancestral Allele	A
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000561820; ENST00000568529; ENST00000379906; ENST00000567238; ENST00000219833; ENST00000566163; ENST00000414754; ENST00000568943)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SLC6A2	solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	16q12.2	16(10/5/1)

SNPs in LD with rs47958 (count: 3) View in gBrowse (chr16:55718818..55729124 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs1345429	intron_variant	1(0/1/0)	0.925[CEU]; 0.833[MEX]; 0.862[MKK]; 0.853[TSI]
rs2279805	downstream_gene_variant; intron_variant	1(0/1/0)	0.925[CEU]; 0.827[MKK]; 0.853[TSI]
rs36017	intron_variant	2(0/2/0)	1.0[CEU]; 0.911[CHB]; 0.953[CHD]; 0.953[GIH]; 0.814[JPT]; 0.955[MEX]; 0.934[TSI]