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- Data Summary
SNP Report
Name | rs565977 dbSNP Ensembl | ||
---|---|---|---|
Location | Chr17:27898828(Fwd) | ||
Variant Alleles | T/C | ||
Ancestral Allele | C | ||
Functional Annotation | NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant. | ||
Consequence to Transcript | NMD_transcript_variant(ENST00000577934) downstream_gene_variant(ENST00000225394; ENST00000579050; ENST00000580132; ENST00000578073; ENST00000578266; ENST00000584522; ENST00000491377; ENST00000578670; ENST00000583940; ENST00000473217; ENST00000585148; ENST00000581348; ENST00000579937; ENST00000394869) intron_variant(ENST00000301057; ENST00000582829; ENST00000581411; ENST00000577934; ENST00000580183; ENST00000581474; ENST00000578749) nc_transcript_variant(ENST00000579674; ENST00000581474) non_coding_exon_variant(ENST00000579674) upstream_gene_variant(ENST00000378818; ENST00000307201) |
||
No. of Studies | 0 (significant: 0; non-significant: 0; trend: 0) | ||
Source | LD-proxy |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.