ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

SNP Report

Basic Info

Name	rs6815704 dbSNP Ensembl
Location	Chr4:93474566(Fwd)
Variant Alleles	G/A
Ancestral Allele	A
Functional Annotation	intron_variant; nc_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000282020; ENST00000505687; ENST00000510992) nc_transcript_variant(ENST00000505687)
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Stergiakouli E., 2012	A/G	A	P=0.0000209, OR=1.4, 95% CI=1.20-1.64 P=0.0000209, OR=1.4, 95% CI=1.20-1.64	One of the top 32 independent SNP in this ADHD GWAS. One of the top 32 independent SNP in this ADHD GWAS.	Trend

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
GRID2	glutamate receptor, ionotropic, delta 2	4q22	1(0/0/1)

Genes from other sources (count: 0)

SNPs in LD with rs6815704 (count: 17) View in gBrowse (chr4:93452467..93515166 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 17)

rs_ID	Functional Annotation	r²[population]
rs7663643	intron_variant; nc_transcript_variant	0.837[ASW]
rs6848991	intron_variant; nc_transcript_variant	1.0[CEU]
rs11730247	intron_variant; nc_transcript_variant	0.923[CHB]; 1.0[JPT]
rs1376116	intron_variant; nc_transcript_variant	1.0[CEU]; 1.0[CHB]; 0.888[JPT]; 0.964[YRI]
rs12508375	intron_variant; nc_transcript_variant	1.0[CEU]
rs7699810	intron_variant; nc_transcript_variant	0.936[CHB]; 0.926[CHD]; 1.0[JPT]
rs7677052	intron_variant; nc_transcript_variant	1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
rs7686758	intron_variant; nc_transcript_variant	0.853[CEU]; 1.0[CHB]; 0.888[JPT]
rs1971197	intron_variant; nc_transcript_variant	1.0[CEU]
rs17019530	intron_variant; nc_transcript_variant	1.0[CEU]
rs1376115	intron_variant; nc_transcript_variant	0.861[CEU]; 1.0[CHB]; 0.888[JPT]; 0.922[YRI]
rs17019538	intron_variant; nc_transcript_variant	0.877[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 0.82[GIH]; 0.888[JPT]; 0.935[LWK]; 1.0[MEX]; 0.954[MKK]; 1.0[TSI]; 0.929[YRI]
rs17019568	intron_variant; nc_transcript_variant	0.942[ASW]; 0.936[CHB]; 0.925[CHD]; 1.0[JPT]; 1.0[LWK]; 0.938[MKK]; 1.0[YRI]
rs7700132	intron_variant; nc_transcript_variant	0.882[ASW]; 0.93[CEU]; 1.0[CHB]; 1.0[CHD]; 0.82[GIH]; 0.888[JPT]; 0.935[LWK]; 1.0[MEX]; 0.955[MKK]; 1.0[TSI]; 0.928[YRI]
rs11934085	intron_variant; nc_transcript_variant	0.824[CHB]; 0.893[CHD]; 0.896[JPT]
rs6532375	intron_variant; nc_transcript_variant	1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 1.0[LWK]; 1.0[MEX]; 1.0[MKK]; 1.0[TSI]; 1.0[YRI]
rs7667109	intron_variant; nc_transcript_variant	0.882[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 0.82[GIH]; 0.888[JPT]; 0.912[LWK]; 0.905[MEX]; 1.0[TSI]