ADHDgene Database

SNP Report

Basic Info

Name	rs7688805 dbSNP Ensembl
Location	Chr4:20732334(Fwd)
Variant Alleles	A/C
Ancestral Allele	A
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000506702; ENST00000467997; ENST00000471979; ENST00000515786) downstream_gene_variant(ENST00000502374; ENST00000513459; ENST00000508952; ENST00000506648; ENST00000502938; ENST00000538990; ENST00000503585; ENST00000295290; ENST00000444671; ENST00000360916) intron_variant(ENST00000506702; ENST00000467997; ENST00000471979; ENST00000507634; ENST00000382148; ENST00000447367; ENST00000382150; ENST00000382152; ENST00000413487; ENST00000382149; ENST00000509207; ENST00000515786; ENST00000359001) nc_transcript_variant(ENST00000382149)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
KCNIP4	Kv channel interacting protein 4	4p15.32	1(1/0/0)

Approved Symbol	Approved Name	Location
PACRGL	PARK2 co-regulated-like	4p15.31

SNPs in LD with rs7688805 (count: 1) View in gBrowse (chr4:20730780..20732334 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs16869915	3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; intron_variant	1(1/0/0)	0.843[ASW]; 0.954[GIH]; 0.811[LWK]; 0.824[TSI]; 0.906[YRI]