ADHDgene Database

SNP Report

Basic Info

Name	rs806368 dbSNP Ensembl
Location	Chr6:88850100(Fwd)
Variant Alleles	T/C
Ancestral Allele	T
Functional Annotation	3_prime_UTR_variant; downstream_gene_variant.
Consequence to Transcript	3_prime_UTR_variant(ENST00000369501; ENST00000535130; ENST00000369499; ENST00000537554) downstream_gene_variant(ENST00000549716; ENST00000362094; ENST00000551417; ENST00000549890; ENST00000428600; ENST00000468898)
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Lu AT, 2008	C/T		P-value>0.05 P-value>0.05	showed no association with ADHD showed no association with ADHD	Non-significant

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
CNR1	cannabinoid receptor 1 (brain)	6q14-q15	1(1/0/0)

SNPs in LD with rs806368 (count: 6) View in gBrowse (chr6:88837616..88857320 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs806374	intron_variant; upstream_gene_variant	0.909[CHB]; 0.847[CHD]; 0.86[JPT]
rs806370	intron_variant; upstream_gene_variant	0.82[ASW]; 0.955[CHB]; 0.954[CHD]; 0.905[JPT]; 0.907[YRI]
rs806372	intron_variant; upstream_gene_variant	0.955[CHB]; 0.905[JPT]; 0.907[YRI]
rs9353524		1.0[CEU]; 0.911[CHB]; 0.864[CHD]; 0.813[JPT]; 0.861[MEX]; 0.965[TSI]
rs9353525		0.819[ASW]; 0.911[CHB]; 0.861[CHD]; 0.86[JPT]; 1.0[LWK]; 0.882[MKK]; 1.0[YRI]
rs806371	intron_variant; upstream_gene_variant	0.951[CHB]; 0.845[JPT]