SNP Report
Basic Info
Name |
rs807701
dbSNP
Ensembl
|
Location |
Chr6:24273791(Fwd) |
Variant Alleles |
G/A |
Ancestral Allele |
G |
Functional Annotation |
intron_variant.
|
Consequence to Transcript |
intron_variant(ENST00000378454) |
No. of Studies |
1 (significant: 1; non-significant: 0; trend: 0) |
Source |
Literature-origin
|
SNP related studies (count: 1)
SNP related genes (count: 1)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 29)
rs_ID |
Functional Annotation |
r2[population] |
rs807700
|
intron_variant |
1.0[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs12055879
|
intron_variant |
1.0[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs3789224
|
intron_variant |
0.935[JPT]
|
rs870601
|
intron_variant |
0.872[CEU]; 0.942[CHB]; 0.935[JPT]
|
rs3789228
|
intron_variant |
0.913[CEU]; 1.0[CHB]; 0.937[JPT]
|
rs9467080
|
intron_variant |
0.881[JPT]
|
rs12216513
|
intron_variant |
1.0[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs6456601
|
intron_variant |
0.805[CEU]; 0.945[CHB]; 0.94[JPT]
|
rs17302729
|
intron_variant |
0.868[JPT]
|
rs3804327
|
intron_variant |
0.881[JPT]
|
rs9295620
|
intron_variant |
0.871[CEU]; 0.942[CHB]; 0.933[JPT]
|
rs1091047
|
intron_variant |
0.881[JPT]
|
rs9379650
|
intron_variant |
0.913[CEU]; 1.0[CHB]; 0.881[JPT]
|
rs3789225
|
intron_variant |
0.871[JPT]
|
rs2328208
|
intron_variant |
0.83[CHB]; 0.937[JPT]
|
rs1109332
|
intron_variant |
0.935[JPT]
|
rs2296538
|
intron_variant |
0.881[JPT]
|
rs11757999
|
intron_variant |
0.94[JPT]
|
rs793843
|
intron_variant |
0.956[CEU]; 0.942[JPT]
|
rs11754278
|
intron_variant |
0.935[JPT]
|
rs11754080
|
intron_variant |
0.94[JPT]
|
rs4052671
|
intron_variant |
0.873[JPT]
|
rs807722
|
intron_variant |
0.957[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs17302512
|
intron_variant |
0.935[JPT]
|
rs2274305
|
missense_variant |
0.913[CEU]; 1.0[CHB]; 0.937[JPT]
|
rs10946689
|
intron_variant |
0.912[CEU]; 1.0[CHB]; 0.869[JPT]
|
rs10806986
|
intron_variant |
0.959[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs17302582
|
intron_variant |
0.881[JPT]
|
rs9379649
|
intron_variant |
0.959[CEU]; 1.0[CHB]; 1.0[JPT]
|