ADHDgene Database
  • Hot Results
  • Quick Search
Keyword:
Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs8179029 dbSNP Ensembl
Location Chr5:1409985(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation downstream_gene_variant; intron_variant.
Consequence to Transcript downstream_gene_variant(ENST00000511750)
intron_variant(ENST00000453492; ENST00000270349)
No. of Studies 4 (significant: 0; non-significant: 4; trend: 0)
Source Literature-origin

SNP related studies (count: 4)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Friedel S, 2007 G/A G FAMHAP P-value=0.14 in single marker association analysis FAMHAP P-value=0.14 in single marker association analysis No association was found with ADHD No association was found with ADHD Non-significant
Brookes K, 2006 A/G UNPHASED TDT P-value=0.203; WHAP TDT P-value=0.098 UNPHASED TDT P-value=0.203; WHAP TDT P-value=0.098 no significant association was observed no significant association was observed Non-significant
Feng Y, 2005(a) A/G allelic TDT P-value (2-sided)=0.763, X2=0.091 allelic TDT P-value (2-sided)=0.763, X2=0.091 no significant association no significant association Non-significant
Genro JP, 2008 A/G P-value=0.922 for total sample; P-value=0.811 for combined s...... P-value=0.922 for total sample; P-value=0.811 for combined sample More... no allele was significantly more transmitted than expected no allele was significantly more transmitted than expected Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs8179029 (count: 4) View in gBrowse (chr5:1392711..1409985 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 3)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014