ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs922781 dbSNP Ensembl
Location Chr15:61070344(Fwd)
Variant Alleles C/G
Ancestral Allele G
Functional Annotation NMD_transcript_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript NMD_transcript_variant(ENST00000551975)
intron_variant(ENST00000335670; ENST00000551975; ENST00000557822; ENST00000559145; ENST00000561093)
nc_transcript_variant(ENST00000557822; ENST00000559145; ENST00000561093)
No. of Studies 2 (significant: 0; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Lantieri F, 2010 C:G Binomial P-value=0.4, OR=1.03 for whole sample; Binomial P-v...... Binomial P-value=0.4, OR=1.03 for whole sample; Binomial P-value=0.16, OR=1.14 for C-subtype More... no significant association no significant association Non-significant
Neale BM, 2008 C:G Uncorrected TDT P-value=6.20E-05 (OR=1.315); Corrected TDT P...... Uncorrected TDT P-value=6.20E-05 (OR=1.315); Corrected TDT P-value=5.62E-05 (OR=1.315) More... One of top 25 results in both uncorrected and corrected TDT ...... One of top 25 results in both uncorrected and corrected TDT test More... Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 1)


SNPs in LD with rs922781 (count: 1) View in gBrowse (chr15:61070183..61070344 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 1)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014