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ADHDgene Database
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Keyword:
Type:
SNP
Gene
Region
Pathway
Study(PMID)
Large-scale studies
Genome-wide Association Studies of ADHD
Genome-wide Linkage Studies of ADHD
Genome-wide CNV Analyses of ADHD
Meta-analysis Studies of ADHD
Data Summary
Published Variant
SNP:
1391
CNV:
398
Others:
173
Published Gene:
359
Published Region:
128
Pathway by PBA:
8
Study:
361
Detail ...
SNP Report
Basic Info
Name
rs9484448
dbSNP
Ensembl
Location
Chr6:141219060(Fwd)
Variant Alleles
C/T
Ancestral Allele
C
No. of Studies
2 (significant: 0; non-significant: 2; trend: 0)
Source
Literature-origin
SNP related studies (count: 2)
Reference
Allele Change
Risk Allele
Statistical Values
Author Comments
Result of Statistical Analysis
Lantieri F, 2010
T:C
Binomial P-value=0.44, OR=0.98 for whole sample; Binomial P-......
Binomial P-value=0.44, OR=0.98 for whole sample; Binomial P-value=0.37, OR=0.94 for C-subtype
More...
no significant association
no significant association
Non-significant
Neale BM, 2008
T:C
Corrected TDT P-value=2.94E-05 (OR=0.7385)
Corrected TDT P-value=2.94E-05 (OR=0.7385)
One of top 25 results in corrected TDT test
One of top 25 results in corrected TDT test
Non-significant
SNP related genes (count: 0)
SNPs in LD with rs9484448 (count: 13)
View in gBrowse (chr6:141182922..141219060 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold
r
2
>=0.8.
Literature-origin SNPs (count: 1)
rs_ID
Functional Annotation
#studies(significant/non-significant/trend)
r
2
[population]
rs6570426
2(0/2/0)
0.867[CEU]; 0.897[TSI]
LD-proxies (count: 12)
rs_ID
Functional Annotation
r
2
[population]
rs6914761
1.0[CHB]; 1.0[JPT]
rs1879506
0.834[JPT]
rs12524925
0.867[CEU]; 0.898[TSI]
rs651226
0.834[JPT]
rs12204980
0.867[CEU]; 0.922[TSI]
rs849294
0.867[CEU]
rs1521150
0.867[CEU]
rs6917444
0.867[CEU]; 0.899[TSI]
rs2328150
0.837[JPT]
rs1856383
1.0[CHB]; 1.0[JPT]
rs2066036
0.837[JPT]
rs6909528
0.837[JPT]