ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

SNP Report

Basic Info

Name	rs9844608 dbSNP Ensembl
Location	Chr3:33774574(Fwd)
Variant Alleles	A/G
Ancestral Allele	G
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Hinney, A., 2011		A	GWAS P-value=9.31E-06, OR=1.45, Replication FBAT P-value=0.5...... GWAS P-value=9.31E-06, OR=1.45, Replication FBAT P-value=0.5347, Combination P-value=1.82E-05 More...	This GWAS in a small group of clinically ascertained young G...... This GWAS in a small group of clinically ascertained young German patients with ADHD and population-based controls did not reveal genome-wide significant findings. Replication attempts in further German and international samples did also not lead to a P-value(s) below 5E-08. More...	Trend

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
CLASP2	cytoplasmic linker associated protein 2	3p24.3	1(0/0/1)

Genes from other sources (count: 0)

SNPs in LD with rs9844608 (count: 36) View in gBrowse (chr3:33600112..33805561 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 36)

rs_ID	Functional Annotation	r²[population]
rs4450748	intron_variant	0.808[CHB]; 0.973[GIH]; 0.953[JPT]; 0.889[LWK]; 0.836[MKK]; 0.963[YRI]
rs6774696	downstream_gene_variant; intron_variant	0.859[CHB]; 0.973[GIH]; 0.951[JPT]; 0.89[LWK]; 0.962[YRI]
rs7638065		0.867[CHB]; 0.828[MEX]
rs7641020	intron_variant; nc_transcript_variant	0.953[CHB]; 0.976[CHD]; 0.85[GIH]; 1.0[JPT]; 0.914[LWK]; 0.83[MKK]; 0.963[YRI]
rs6770784	intron_variant; nc_transcript_variant; upstream_gene_variant	0.817[CHB]; 0.818[JPT]
rs6550229	intron_variant; nc_transcript_variant; upstream_gene_variant	0.864[JPT]
rs9840630	intron_variant; nc_transcript_variant	0.938[ASW]; 0.867[CEU]; 0.907[CHB]; 0.838[CHD]; 0.953[JPT]; 0.89[LWK]; 0.957[MEX]; 0.924[MKK]; 0.81[TSI]; 0.86[YRI]
rs13098051		0.822[JPT]
rs9867080	intron_variant; upstream_gene_variant	0.814[CHB]; 0.814[CHD]; 0.973[GIH]; 0.953[JPT]
rs7624319	intron_variant; nc_transcript_variant	0.938[ASW]; 0.955[CEU]; 0.904[CHB]; 0.945[GIH]; 0.953[JPT]; 0.89[LWK]; 0.912[MEX]; 0.908[MKK]; 0.885[TSI]; 0.963[YRI]
rs9858415		0.841[CHB]; 0.846[JPT]; 0.859[YRI]
rs9809240	downstream_gene_variant; intron_variant; nc_transcript_variant	0.859[CHB]; 0.811[CHD]; 0.973[GIH]; 0.952[JPT]; 0.831[MEX]; 0.927[YRI]
rs4437091	intron_variant; nc_transcript_variant	0.859[CHB]; 0.838[CHD]; 0.973[GIH]; 0.953[JPT]
rs6807732	intron_variant	0.859[CHB]; 0.814[CHD]; 0.973[GIH]; 0.953[JPT]; 0.89[LWK]; 0.963[YRI]
rs9817358	intron_variant; upstream_gene_variant	0.938[ASW]; 0.859[CHB]; 0.814[CHD]; 0.953[JPT]
rs9849641	downstream_gene_variant; intron_variant; nc_transcript_variant	0.822[JPT]; 0.852[LWK]; 0.806[MKK]
rs4402882		0.898[CHB]
rs9847845	intron_variant; nc_transcript_variant	0.854[CHB]; 0.814[CHD]; 0.973[GIH]; 0.952[JPT]; 0.954[LWK]; 0.963[YRI]
rs9856967	downstream_gene_variant; intron_variant	0.878[ASW]; 0.822[JPT]; 0.82[YRI]
rs9839531		0.822[JPT]
rs12106734	downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant	0.861[JPT]
rs4549233		0.851[CHB]
rs6550225	intron_variant; nc_transcript_variant	0.859[CHB]; 0.973[GIH]; 0.953[JPT]; 0.89[LWK]; 0.963[YRI]
rs9311026		0.909[CHB]; 0.828[MEX]
rs4678614	downstream_gene_variant	0.822[JPT]
rs4287875	upstream_gene_variant	0.953[CHB]; 1.0[CHD]; 0.85[GIH]; 1.0[JPT]
rs4679073	intron_variant; nc_transcript_variant; upstream_gene_variant	0.816[JPT]
rs3934853		0.867[CHB]; 0.833[MEX]
rs6781846		0.864[CHB]
rs9311020	intron_variant	0.863[CHB]; 0.953[JPT]; 0.84[YRI]
rs4328759	intron_variant; upstream_gene_variant	0.859[CHB]; 0.973[GIH]; 0.953[JPT]; 0.89[LWK]; 0.963[YRI]
rs4513404		0.815[ASW]; 0.867[CHB]; 0.862[CHD]; 0.872[MEX]; 0.893[YRI]
rs9853831	intron_variant; nc_transcript_variant	0.859[CHB]; 0.814[CHD]; 0.973[GIH]; 0.953[JPT]; 0.928[YRI]
rs7643855	intron_variant; upstream_gene_variant	0.863[CHB]; 0.814[CHD]; 1.0[GIH]; 0.905[JPT]
rs9839042	intron_variant; nc_transcript_variant	0.954[CEU]; 0.907[CHB]; 0.838[CHD]; 0.945[GIH]; 0.953[JPT]; 0.915[MEX]; 0.878[TSI]
rs9830766	downstream_gene_variant	0.864[JPT]