ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs998850 dbSNP Ensembl
Location Chr7:50607388(Fwd)
Variant Alleles G/C
Ancestral Allele G
Functional Annotation NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript NMD_transcript_variant(ENST00000444733)
downstream_gene_variant(ENST00000432526; ENST00000420203)
intron_variant(ENST00000357936; ENST00000431062; ENST00000444124; ENST00000444733; ENST00000426377; ENST00000380984; ENST00000430300; ENST00000454521; ENST00000489162)
nc_transcript_variant(ENST00000454521; ENST00000489162)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Guan L, 2009 single SNP association analyses: Nominal P-value=0.032, Empi...... single SNP association analyses: Nominal P-value=0.032, Empirical P-value=0.255 for ADHD-I More... non-significant for ADHD, but achieve nominal significance f...... non-significant for ADHD, but achieve nominal significance for ADHD-I More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs998850 (count: 5) View in gBrowse (chr7:50597301..50618876 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 5)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014