ADHDgene Database

SNP Report

Basic Info

Name	rs11664 dbSNP Ensembl
Location	Chr17:79082862(Fwd)
Variant Alleles	G/A
Ancestral Allele	G
Functional Annotation	3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant.
Consequence to Transcript	3_prime_UTR_variant(ENST00000321280; ENST00000572329; ENST00000575712) NMD_transcript_variant(ENST00000572329) downstream_gene_variant(ENST00000576756; ENST00000416299) intron_variant(ENST00000428708; ENST00000435091; ENST00000575245; ENST00000576225; ENST00000572498; ENST00000575841; ENST00000392411; ENST00000321300) nc_transcript_variant(ENST00000576225; ENST00000576995) non_coding_exon_variant(ENST00000576995)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
BAIAP2	BAI1-associated protein 2	17q25	1(1/0/0)

SNPs in LD with rs11664 (count: 2) View in gBrowse (chr17:79056453..79082862 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs4075482	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/1/0)	0.908[CHB]; 0.908[JPT]
rs4969245	NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/1/0)	1.0[CHB]; 0.976[CHD]; 1.0[JPT]