ADHDgene Database

SNP Report

Basic Info

Name	rs500803 dbSNP Ensembl
Location	Chr6:16754454(Fwd)
Variant Alleles	T/A
Functional Annotation	intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000473388; ENST00000244769; ENST00000492857; ENST00000483954; ENST00000498374; ENST00000479680; ENST00000467008; ENST00000436367; ENST00000344707; ENST00000450222; ENST00000296858) nc_transcript_variant(ENST00000473388; ENST00000483954; ENST00000498374; ENST00000492857; ENST00000479680; ENST00000467008) upstream_gene_variant(ENST00000495178; ENST00000483591)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
ATXN1	ataxin 1	6p23	1(0/0/1)

SNPs in LD with rs500803 (count: 2) View in gBrowse (chr6:16749567..16754454 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs649266	downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/0/1)	0.915[CEU]; 1.0[CHB]; 0.903[JPT]; 0.914[YRI]
rs607138	downstream_gene_variant; intron_variant; nc_transcript_variant	1(0/0/1)	0.916[CEU]; 1.0[CHB]; 0.903[JPT]; 0.914[YRI]