SNP Report
Basic Info
Name |
rs6069689
dbSNP
Ensembl
|
Location |
Chr20:54858425(Fwd) |
Variant Alleles |
G/A |
Ancestral Allele |
A |
No. of Studies |
0 (significant: 0; non-significant: 0; trend: 0) |
Source |
LD-proxy
|
SNP related studies (count: 0)
SNP related genes (count: 0)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 4)
|
rs_ID |
Functional Annotation |
#studies(significant/non-significant/trend) |
r2[population] |
rs1980818
|
upstream_gene_variant |
1(0/1/0)
|
0.953[CHD]; 0.892[GIH]; 1.0[JPT]; 0.829[TSI]
|
rs1326022
|
nc_transcript_variant; non_coding_exon_variant |
1(0/1/0)
|
0.857[CHB]; 0.953[CHD]; 1.0[JPT]; 0.815[TSI]
|
rs1326021
|
nc_transcript_variant; non_coding_exon_variant |
1(0/1/0)
|
0.817[CEU]; 0.857[CHB]; 0.953[CHD]; 1.0[JPT]; 0.815[TSI]
|
rs6014664
|
downstream_gene_variant |
1(0/0/1)
|
0.931[CHB]; 1.0[CHD]; 0.928[GIH]; 1.0[JPT]; 0.9[TSI]
|
LD-proxies (count: 0)