ADHDgene Database

SNP Report

Basic Info

Name	rs6791644 dbSNP Ensembl
Location	Chr3:60771108(Fwd)
Variant Alleles	A/G
Ancestral Allele	G
Functional Annotation	intron_variant; nc_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000476844; ENST00000492590; ENST00000488467; ENST00000468189; ENST00000490952) nc_transcript_variant(ENST00000490952)
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Lasky-Su J, 2008			P-value=8.32E-06 under Recessive model for Total ADHD sympto...... P-value=8.32E-06 under Recessive model for Total ADHD symptom count More...	association finding with P-value association finding with P-value	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
FHIT	fragile histidine triad gene	3p14.2	1(0/0/1)

SNPs in LD with rs6791644 (count: 10) View in gBrowse (chr3:60759742..60787599 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs6794160	intron_variant; nc_transcript_variant	0.851[CHB]; 0.95[CHD]
rs4974241	intron_variant; nc_transcript_variant	0.851[CHB]; 0.898[CHD]
rs1014856	intron_variant; nc_transcript_variant	1.0[CHB]; 0.948[CHD]; 1.0[JPT]
rs17063990	intron_variant; nc_transcript_variant	1.0[CHB]; 1.0[CHD]; 1.0[JPT]
rs12492901	intron_variant; nc_transcript_variant	1.0[CHB]; 0.864[JPT]
rs4974228	intron_variant; nc_transcript_variant	0.862[CHD]
rs12491786	intron_variant; nc_transcript_variant	0.92[CHB]; 1.0[CHD]; 1.0[JPT]
rs17680697	intron_variant; nc_transcript_variant	1.0[CHB]; 0.904[CHD]; 0.864[JPT]
rs1447927	intron_variant; nc_transcript_variant	0.916[CHB]; 0.893[CHD]; 1.0[JPT]
rs12492010	intron_variant; nc_transcript_variant	1.0[CHB]; 1.0[JPT]