SNP Report
Basic Info
Name |
rs802888
dbSNP
Ensembl
|
Location |
ChrX:7120421(Fwd) |
Variant Alleles |
A/G |
Ancestral Allele |
A |
No. of Studies |
0 (significant: 0; non-significant: 0; trend: 0) |
Source |
LD-proxy
|
SNP related studies (count: 0)
SNP related genes (count: 0)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 5)
|
rs_ID |
Functional Annotation |
#studies(significant/non-significant/trend) |
r2[population] |
rs5934740
|
intron_variant |
2(0/2/0)
|
0.899[CEU]; 1.0[CHB]; 1.0[CHD]; 0.962[GIH]; 1.0[JPT]
|
rs5934769
|
intron_variant |
1(1/0/0)
|
0.9[CEU]; 1.0[CHB]; 1.0[CHD]; 0.962[GIH]; 1.0[JPT]; 0.973[MKK]; 1.0[YRI]
|
rs1473666
|
downstream_gene_variant; intron_variant; nc_transcript_variant |
1(0/1/0)
|
1.0[CHD]; 0.818[GIH]
|
rs6639786
|
intron_variant |
1(1/0/0)
|
0.9[CEU]; 1.0[CHB]; 1.0[CHD]; 0.961[GIH]; 1.0[JPT]; 1.0[MKK]; 1.0[YRI]
|
rs4403552
|
intron_variant |
1(0/1/0)
|
0.932[CHB]; 0.816[CHD]; 0.93[JPT]
|
LD-proxies (count: 0)