ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	GOSR1
Symbol Alias	GOS28, P28, GS28, GOS-28, GOLIM2
Approved Name	golgi SNAP receptor complex member 1
Name Alias	golgi integral membrane protein 2
Location	17q11
Position	chr17:28804426-28853837, +
External Links	HGNC: 4430 Entrez Gene: 9527 Ensembl: ENSG00000108587 UCSC: uc002hfe.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by CNV; Mapped by PBA pathway

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 1)

ID	Location	Size	Band	Type	Inheritance
CNV_Elia[2010]_192	chr17:25613604-26191779 (NCBI Build 35 (hg17))	578176	17q11.2	Duplication	Paternal

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 11)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 1)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0048193	Golgi vesicle transport	Biological Process		49

GO terms by database search (count: 10)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0006891	intra-Golgi vesicle-mediated transport	Biological Process	TAS[8636227]	13
GO:0006888	ER to Golgi vesicle-mediated transport	Biological Process		24
GO:0005801	cis-Golgi network	Cellular Component		14
GO:0005794	Golgi apparatus	Cellular Component	IDA[15215310]	157
GO:0042147	retrograde transport, endosome to Golgi	Biological Process	IDA[15215310]	5
GO:0031201	SNARE complex	Cellular Component	TAS[15215310]	13
GO:0016021	integral to membrane	Cellular Component		845
GO:0015031	protein transport	Biological Process		75
GO:0000139	Golgi membrane	Cellular Component		95
GO:0005484	SNAP receptor activity	Molecular Function	IDA[15215310]	13

Gene related KEGG pathways (count: 1)

ID	Name	No. of Genes in ADHDgene	Brief Description
hsa04130	SNARE interactions in vesicular transport	20

Genes shared at least 5 GO terms with GOSR1 (count: 12)

Gene Symbol	Pathway Count	Pathway List
STX16	8	intra-Golgi vesicle-mediated transport; Golgi apparatus; retrograde transport, endosome to Golgi; SNARE complex; integral to membrane; Golgi vesicle transport; Golgi membrane; SNAP receptor activity;
YKT6	8	ER to Golgi vesicle-mediated transport; Golgi apparatus; retrograde transport, endosome to Golgi; SNARE complex; protein transport; Golgi vesicle transport; Golgi membrane; SNAP receptor activity;
STX5	7	ER to Golgi vesicle-mediated transport; Golgi apparatus; retrograde transport, endosome to Golgi; SNARE complex; integral to membrane; Golgi membrane; SNAP receptor activity;
STX6	7	Golgi apparatus; retrograde transport, endosome to Golgi; SNARE complex; integral to membrane; Golgi vesicle transport; Golgi membrane; SNAP receptor activity;
BET1	6	ER to Golgi vesicle-mediated transport; cis-Golgi network; integral to membrane; protein transport; Golgi vesicle transport; Golgi membrane;
LMAN2L	6	ER to Golgi vesicle-mediated transport; Golgi apparatus; integral to membrane; protein transport; Golgi vesicle transport; Golgi membrane;
COG3	5	intra-Golgi vesicle-mediated transport; ER to Golgi vesicle-mediated transport; cis-Golgi network; Golgi apparatus; Golgi vesicle transport;
GOSR2	5	ER to Golgi vesicle-mediated transport; integral to membrane; protein transport; Golgi vesicle transport; Golgi membrane;
SEC22B	5	ER to Golgi vesicle-mediated transport; integral to membrane; protein transport; Golgi vesicle transport; Golgi membrane;
STX18	5	ER to Golgi vesicle-mediated transport; integral to membrane; Golgi vesicle transport; Golgi membrane; SNAP receptor activity;
TMED10	5	ER to Golgi vesicle-mediated transport; cis-Golgi network; Golgi apparatus; integral to membrane; Golgi vesicle transport;
GOLGA5	5	cis-Golgi network; Golgi apparatus; integral to membrane; Golgi vesicle transport; Golgi membrane;

Genes shared at least 2 KEGG pathways with GOSR1 (count: 0)

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Region: chr17:28804426..28853837 View in gBrowse